DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and RHOV

DIOPT Version :9

Sequence 1:NP_001261247.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_598378.3 Gene:RHOV / 171177 HGNCID:18313 Length:236 Species:Homo sapiens


Alignment Length:175 Identity:99/175 - (56%)
Similarity:126/175 - (72%) Gaps:1/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            ||||:||||||||:.|::|||.|.:|..|.||..|.:|..|:||..|:.:.|||||||||:||||
Human    32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLR 96

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKL-RDK 132
            .|.||.|||||.|||:|.|:||:|:..||.||:|.|.|..|::||||:.|||||.|.:.:| :..
Human    97 SLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGG 161

  Fly   133 KLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVL 177
            :..|:..||...:|::|.|..||||||||||.||.|||.||.|.:
Human   162 REGPVPQPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAI 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_001261247.1 Rac1_like 3..176 CDD:206663 98/172 (57%)
RHOVNP_598378.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Wrch_1 32..205 CDD:133330 98/172 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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