DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac1 and Rhoq

DIOPT Version :10

Sequence 1:NP_476950.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_663466.2 Gene:Rhoq / 104215 MGIID:1931553 Length:205 Species:Mus musculus


Alignment Length:195 Identity:120/195 - (61%)
Similarity:148/195 - (75%) Gaps:6/195 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :||||||||||||||||:||..:|||.||:|||||:|:.:|.|..|...|||:||||||||||||
Mouse    10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLR 74

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKK 133
            |||||.|||||||||:||||||:||:.:|.||::.:.|:.|.:|:||::|||||..|:.:|.|.|
Mouse    75 PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139

  Fly   134 LAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPKSKR------KCALL 192
            ..|:...||..:||||||..|:||||||||||||||||||.::|.|......||      .|.|:
Mouse   140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKKRIGSRCINCCLI 204

  Fly   193  192
            Mouse   205  204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac1NP_476950.1 Rac1_like 3..176 CDD:206663 114/171 (67%)
RhoqNP_663466.2 Tc10 10..183 CDD:206707 114/172 (66%)
Effector region. /evidence=ECO:0000250 38..46 6/7 (86%)

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