DRSC/TRiP Functional Genomics Resources

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Protein Alignment scf and AT5G08580

DIOPT Version :10

Sequence 1:NP_477392.1 Gene:scf / 38145 FlyBaseID:FBgn0025682 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_568202.1 Gene:AT5G08580 / 830759 AraportID:AT5G08580 Length:391 Species:Arabidopsis thaliana


Alignment Length:356 Identity:94/356 - (26%)
Similarity:150/356 - (42%) Gaps:80/356 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HNPLEHDPL---------------------HP-------RHFDGGEHNAQFDHEAFLGPDESKKF 69
            |:|:..|||                     ||       :...||.|.....||:   ..|.::|
plant    56 HDPVPFDPLVADMERRREDKEWERQYIEHSHPELVSHSQKETTGGGHEHAPGHES---QPEWEEF 117

  Fly    70 ----DSLTPEES---RRRLGVIVDRIDEN-KDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNP 126
                |.|..||.   ..||.::..:||.: .||.:|.:||..|...:..:.:.....|....|:.
plant   118 MDAEDYLNDEEKFNVTDRLILLFPKIDVSPADGFMTESELTEWTMQSSAKEVVHRTQRDLDVHDR 182

  Fly   127 DNNETISWDSYMQTVYGFMDDLSPDE--KEQEENGVSY-KSLLKRDRYRWSVADQDLDDNLTKDE 188
            :.:..||:..|           .|..  ::.:.|...| ....|.:.:..|.|:.|...|||  |
plant   183 NKDGFISFSEY-----------EPPSWVRKSDNNSFGYDMGWWKEEHFNASDANGDGLLNLT--E 234

  Fly   189 FTAFLHPED--HPSMKGVVLRETITDLDKDHDGKISVDE-----------YIGDMYRSTGAEDEE 240
            |..||||.|  :|.:...:.:|.:.:.|.|.|||||.:|           |..|.:.||....:.
plant   235 FNDFLHPADTKNPKLLLWLCKEEVRERDSDKDGKISFEEFFHGLFDTVRNYEEDNHNSTHPYHDL 299

  Fly   241 PEWVANEREAFSTHRDLDK--DGYLNEEEVKQWIA---PHDFDHSEAEAKHLLFEADADHDDKLT 300
            ||..|  ::.||   .|||  ||||::.|:...|:   |.:..:::.:|.:::.:||:|.|.:||
plant   300 PEGPA--KQLFS---QLDKNDDGYLSDVELLPIISKIHPTEHYYAKQQADYIISQADSDKDRRLT 359

  Fly   301 KEEILDKYDVFVGS--QATDFGEALARHDEF 329
            ..|:::...||..:  ...|..:....||||
plant   360 LAEMIEHPYVFYSAIFDEDDTDDDYGFHDEF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scfNP_477392.1 EFh_CREC_Calumenin_like 45..313 CDD:320024 82/296 (28%)
EF-hand motif 45..74 CDD:320024 9/32 (28%)
EF-hand motif 80..109 CDD:320024 10/29 (34%)
EF-hand motif 116..145 CDD:320024 5/28 (18%)
EF-hand motif 168..197 CDD:320024 12/28 (43%)
EF-hand motif 205..234 CDD:320024 11/39 (28%)
EF-hand motif 247..276 CDD:320024 12/33 (36%)
EF-hand motif 283..313 CDD:320024 10/29 (34%)
AT5G08580NP_568202.1 EFh_CREC 102..370 CDD:330175 78/288 (27%)
EF-hand motif 102..125 CDD:320021 6/25 (24%)
EF-hand motif 135..165 CDD:320021 10/29 (34%)
EF-hand motif 172..201 CDD:320021 6/39 (15%)
EF-hand motif 219..245 CDD:320021 13/27 (48%)
EF-hand motif 253..282 CDD:320021 9/28 (32%)
EF-hand motif 294..335 CDD:320021 15/45 (33%)
EF-hand motif 342..370 CDD:320021 8/27 (30%)

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