DRSC/TRiP Functional Genomics Resources

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Protein Alignment scf and AT5G08580

DIOPT Version :9

Sequence 1:NP_477392.1 Gene:scf / 38145 FlyBaseID:FBgn0025682 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001332577.1 Gene:AT5G08580 / 830759 AraportID:AT5G08580 Length:391 Species:Arabidopsis thaliana


Alignment Length:356 Identity:94/356 - (26%)
Similarity:150/356 - (42%) Gaps:80/356 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HNPLEHDPL---------------------HP-------RHFDGGEHNAQFDHEAFLGPDESKKF 69
            |:|:..|||                     ||       :...||.|.....||:   ..|.::|
plant    56 HDPVPFDPLVADMERRREDKEWERQYIEHSHPELVSHSQKETTGGGHEHAPGHES---QPEWEEF 117

  Fly    70 ----DSLTPEES---RRRLGVIVDRIDEN-KDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNP 126
                |.|..||.   ..||.::..:||.: .||.:|.:||..|...:..:.:.....|....|:.
plant   118 MDAEDYLNDEEKFNVTDRLILLFPKIDVSPADGFMTESELTEWTMQSSAKEVVHRTQRDLDVHDR 182

  Fly   127 DNNETISWDSYMQTVYGFMDDLSPDE--KEQEENGVSY-KSLLKRDRYRWSVADQDLDDNLTKDE 188
            :.:..||:..|           .|..  ::.:.|...| ....|.:.:..|.|:.|...|||  |
plant   183 NKDGFISFSEY-----------EPPSWVRKSDNNSFGYDMGWWKEEHFNASDANGDGLLNLT--E 234

  Fly   189 FTAFLHPED--HPSMKGVVLRETITDLDKDHDGKISVDE-----------YIGDMYRSTGAEDEE 240
            |..||||.|  :|.:...:.:|.:.:.|.|.|||||.:|           |..|.:.||....:.
plant   235 FNDFLHPADTKNPKLLLWLCKEEVRERDSDKDGKISFEEFFHGLFDTVRNYEEDNHNSTHPYHDL 299

  Fly   241 PEWVANEREAFSTHRDLDK--DGYLNEEEVKQWIA---PHDFDHSEAEAKHLLFEADADHDDKLT 300
            ||..|  ::.||   .|||  ||||::.|:...|:   |.:..:::.:|.:::.:||:|.|.:||
plant   300 PEGPA--KQLFS---QLDKNDDGYLSDVELLPIISKIHPTEHYYAKQQADYIISQADSDKDRRLT 359

  Fly   301 KEEILDKYDVFVGS--QATDFGEALARHDEF 329
            ..|:::...||..:  ...|..:....||||
plant   360 LAEMIEHPYVFYSAIFDEDDTDDDYGFHDEF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scfNP_477392.1 EF-hand_7 170..227 CDD:290234 23/69 (33%)
EFh 206..273 CDD:238008 26/79 (33%)
EF-hand_7 248..308 CDD:290234 20/64 (31%)
EFh 248..306 CDD:298682 20/62 (32%)
AT5G08580NP_001332577.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4223
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 83 1.000 Inparanoid score I2353
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D909079at2759
OrthoFinder 1 1.000 - - FOG0000638
OrthoInspector 1 1.000 - - mtm1075
orthoMCL 1 0.900 - - OOG6_105526
Panther 1 1.100 - - O PTHR10827
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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