Protein Alignment scf and myd

DIOPT Version :10

• Sequence 1: NP_477392.1
• Gene: scf / 38145
• FlyBaseID: FBgn0025682
• Length: 329
• Species: Drosophila melanogaster
• Sequence 2: NP_732406.1
• Gene: myd / 42303
• FlyBaseID: FBgn0051475
• Length: 418
• Species: Drosophila melanogaster
• Alignment Length: 356
• Identity: 82/356 - (23%)
• Similarity: 146/356 - (41%)
• Gaps: 86/356 - (24%)

  Fly    29 EELPHNPLEHDP---LHP--RHFDG-GEHNAQFDHEAFLGPDESKKFDSLT-----PE------- 75
            :||.....:|:.   |.|  .:.|. .|:|.:..|      .:|:|..:.:     ||
  Fly    94 QELEQQQQKHEQSMRLQPVANNLDSRNENNHRQPH------PQSQKVQNASKSPNQPETVILAAS 152

  Fly    76 --ESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEE---------------DVGRVWKQ 123
              ..::.|.....|.|.::||.:::.||..   |..||.:|.               |:|..
  Fly   153 NVNEKQILAKAFKRADRSRDGILSIQELGQ---YINRRIVEHIDEAIMNNAREFRRVDIGPA--- 211

  Fly   124 HNPDNNETISWDSYMQTVYGFMDDLSPDEKE-QEENGVSYKSL-------LKRDRYRWSVADQDL 180
                 :..|:||.|.:.   |:.:....|.: .|.:.:.:.:|       :.||:.|||.|.:..
  Fly   212 -----DGLITWDEYHRF---FLREHGMTEADIDEHDEIRHTALNRRAREDMMRDKARWSEAARTD 268

  Fly   181 DDNLTKDEFTAFLHPEDHPSMKGVVLRETITDL----DKDHDGKISVDEYIGDMYRSTGAEDEE- 240
            ...||.||:.:|.|||...|.    |.|.:.||    |:|.|.:::::|: .|:    ..:|::
  Fly   269 LFTLTIDEYLSFRHPESSVSN----LLELVDDLLRQFDQDGDDQLTLEEF-SDL----NVDDDDD 324

  Fly   241 -------PEWVANEREAFSTHRDLDKDGYLNEEEVKQWIAPHDFDHSEAEAKHLLFEADADHDDK 298
                   .:.:...||.|....|.:.||..:..|:..::.|....::..||..|....|.:.|:.
  Fly   325 LMRKSLISKTLVERREEFKRIIDKNHDGKADRGELLNYVNPKTPRYALQEAATLFSLCDENKDEL 389

  Fly   299 LTKEEILDKYDVFVGSQATDFGEALARHDEF 329
            ||.:|:.|..::|:.|:..|...:.  |.||
  Fly   390 LTLKEMTDHAEIFLQSKMIDTANSF--HTEF 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scf	NP_477392.1	EFh_CREC_Calumenin_like	45..313	CDD:320024	72/317 (23%)
		EF-hand motif	45..74	CDD:320024	6/34 (18%)
		EF-hand motif	80..109	CDD:320024	8/28 (29%)
		EF-hand motif	116..145	CDD:320024	6/28 (21%)
		EF-hand motif	168..197	CDD:320024	13/28 (46%)
		EF-hand motif	205..234	CDD:320024	9/32 (28%)
		EF-hand motif	247..276	CDD:320024	8/28 (29%)
		EF-hand motif	283..313	CDD:320024	10/29 (34%)
myd	NP_732406.1	EFh_CREC	160..403	CDD:330175	63/265 (24%)
		EF-hand motif	160..188	CDD:320023	9/30 (30%)
		EF-hand motif	198..228	CDD:320023	7/40 (18%)
		EF-hand motif	256..285	CDD:320023	13/28 (46%)
		EF-hand motif	293..322	CDD:320023	7/33 (21%)
		EF-hand motif	338..367	CDD:320023	8/28 (29%)
		EF-hand motif	374..403	CDD:320023	9/28 (32%)