DRSC/TRiP Functional Genomics Resources

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Protein Alignment scf and calua

DIOPT Version :9

Sequence 1:NP_477392.1 Gene:scf / 38145 FlyBaseID:FBgn0025682 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001002151.2 Gene:calua / 415241 ZFINID:ZDB-GENE-040625-166 Length:317 Species:Danio rerio


Alignment Length:331 Identity:171/331 - (51%)
Similarity:226/331 - (68%) Gaps:19/331 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTRIQMLLLVVALTAVISGASASSIPEELPHNPLEHD-PLHPRHFDGGEHNAQFDHEAFLGPDES 66
            :..|:.||:..||..|.    |:|.|.| ..:.:.|| ||..:..|.|. |.::||:||||.:|:
Zfish     2 KMEIRPLLMCFALCVVY----ATSKPTE-KKDRVHHDAPLSSKEHDDGT-NFEYDHDAFLGEEEA 60

  Fly    67 KKFDSLTPEESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDNNET 131
            |.||.||||||:.|||.||::||.::||.||.||||.||...|::||.::|.|.||..:.:|:..
Zfish    61 KTFDDLTPEESKNRLGKIVEKIDADEDGFVTEAELKAWIKKAQKKYIYDNVERQWKDFDLNNDRM 125

  Fly   132 ISWDSYMQTVYG-FMDDLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLHP 195
            |||:.|....|| ::||..||:      |.:||.::.||..|:.:||.:.|....|:||||||||
Zfish   126 ISWEEYKNVTYGTYLDDPEPDD------GYNYKQMMARDERRFKMADGNGDHIADKEEFTAFLHP 184

  Fly   196 EDHPSMKGVVLRETITDLDKDHDGKISVDEYIGDMYRSTGAEDE--EPEWVANEREAFSTHRDLD 258
            |::..||.:|:.||:.|:||:.||.|.::|||||||..   |||  ||||||.|||.||..||.:
Zfish   185 EEYEHMKDIVVLETMEDIDKNGDGFIDLEEYIGDMYNH---EDEMDEPEWVATEREQFSEFRDKN 246

  Fly   259 KDGYLNEEEVKQWIAPHDFDHSEAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEAL 323
            |||.::.||...||.|.|:||:|||||||::|:|.:.|.||||||||:|||:|||||||||||||
Zfish   247 KDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEAL 311

  Fly   324 ARHDEF 329
            .|||||
Zfish   312 VRHDEF 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scfNP_477392.1 EF-hand_7 170..227 CDD:290234 26/56 (46%)
EFh 206..273 CDD:238008 37/68 (54%)
EF-hand_7 248..308 CDD:290234 35/59 (59%)
EFh 248..306 CDD:298682 34/57 (60%)
caluaNP_001002151.2 EF-hand_7 75..132 CDD:290234 27/56 (48%)
EF-hand_7 159..216 CDD:290234 26/56 (46%)
EFh 159..216 CDD:298682 26/56 (46%)
EFh 200..260 CDD:238008 34/62 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 93 1.000 Domainoid score I7507
eggNOG 1 0.900 - - E1_KOG4223
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H936
Inparanoid 1 1.050 327 1.000 Inparanoid score I2449
OMA 1 1.010 - - QHG48619
OrthoDB 1 1.010 - - D372250at33208
OrthoFinder 1 1.000 - - FOG0000638
OrthoInspector 1 1.000 - - otm26091
orthoMCL 1 0.900 - - OOG6_105526
Panther 1 1.100 - - O PTHR10827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3115
SonicParanoid 1 1.000 - - X1088
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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