DRSC/TRiP Functional Genomics Resources

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Protein Alignment scf and calub

DIOPT Version :9

Sequence 1:NP_477392.1 Gene:scf / 38145 FlyBaseID:FBgn0025682 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_957376.1 Gene:calub / 394057 ZFINID:ZDB-GENE-040426-1251 Length:315 Species:Danio rerio


Alignment Length:323 Identity:167/323 - (51%)
Similarity:225/323 - (69%) Gaps:15/323 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLVVALTAVISGASASSIPEELPHNPLEHD-PLHPRHFDGGEHNAQFDHEAFLGPDESKKFDSL 72
            ||.||||..:    .:||.|.| ..:.:.|| ||..:..| .|.|..:|||||||.:|:|.||.|
Zfish     6 LLFVVALCIL----QSSSKPME-KKDRVHHDAPLSNKDHD-DEENFDYDHEAFLGQEEAKTFDQL 64

  Fly    73 TPEESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDNNETISWDSY 137
            |||||:.|||.||::|||:.||.||..|:|.||.:.|||:|.|||.|.|:.|:.:::..:||:.|
Zfish    65 TPEESKERLGKIVEKIDEDHDGFVTADEMKRWIKHAQRRWIYEDVDRQWQAHDLNSDSFVSWEEY 129

  Fly   138 MQTVYGF-MDDLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLHPEDHPSM 201
            ....||: :|:..|      |:|.:|:.::.||..|:.:||||.|....|:|||||||||:...|
Zfish   130 KDATYGYILDEADP------EDGFNYRQMMTRDERRFKMADQDGDLRANKEEFTAFLHPEEFDYM 188

  Fly   202 KGVVLRETITDLDKDHDGKISVDEYIGDMYRSTGAEDEEPEWVANEREAFSTHRDLDKDGYLNEE 266
            |.:|:.||:.|:||:.||.|.::|||||||...| :..|||||..|||.|:..||.:|||.::::
Zfish   189 KDIVVLETMEDIDKNGDGLIDLNEYIGDMYSQNG-DSSEPEWVKTEREQFTEFRDKNKDGRMDKD 252

  Fly   267 EVKQWIAPHDFDHSEAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 329
            |.:.||.|.|:||:||||||||:|:|||.|.:|||:||:||||:||||||||||:||.|||||
Zfish   253 ETRDWILPADYDHAEAEAKHLLYESDADKDGRLTKQEIVDKYDLFVGSQATDFGDALVRHDEF 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scfNP_477392.1 EF-hand_7 170..227 CDD:290234 28/56 (50%)
EFh 206..273 CDD:238008 32/66 (48%)
EF-hand_7 248..308 CDD:290234 34/59 (58%)
EFh 248..306 CDD:298682 33/57 (58%)
calubNP_957376.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..42 6/21 (29%)
EFh 45..98 CDD:298682 32/52 (62%)
EF-hand_7 73..132 CDD:290234 28/58 (48%)
EFh 75..132 CDD:298682 26/56 (46%)
EF-hand_7 157..214 CDD:290234 28/56 (50%)
EFh 157..214 CDD:298682 28/56 (50%)
EFh 198..258 CDD:298682 29/60 (48%)
Prevents secretion from ER. /evidence=ECO:0000250 312..315 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 146 1.000 Domainoid score I4512
eggNOG 1 0.900 - - E1_KOG4223
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 327 1.000 Inparanoid score I2449
OMA 1 1.010 - - QHG48619
OrthoDB 1 1.010 - - D372250at33208
OrthoFinder 1 1.000 - - FOG0000638
OrthoInspector 1 1.000 - - otm26091
orthoMCL 1 0.900 - - OOG6_105526
Panther 1 1.100 - - LDO PTHR10827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3115
SonicParanoid 1 1.000 - - X1088
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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