DRSC/TRiP Functional Genomics Resources

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Protein Alignment scf and calu-1

DIOPT Version :9

Sequence 1:NP_477392.1 Gene:scf / 38145 FlyBaseID:FBgn0025682 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_001370866.1 Gene:calu-1 / 180769 WormBaseID:WBGene00019760 Length:314 Species:Caenorhabditis elegans


Alignment Length:331 Identity:141/331 - (42%)
Similarity:199/331 - (60%) Gaps:30/331 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IQMLLLVVALTAVISGASASSIPEELPHNPLEHDPLHPRHFDGGEHNAQFDHEAFLGPDESKKFD 70
            :::||.|..|.|....:..||.|.:           ...||.|.||:.::|||.|||.|.:.:||
 Worm     1 MKVLLFVGLLAATALASHHSSDPSK-----------DGEHFKGKEHDKKYDHEQFLGKDTAAEFD 54

  Fly    71 SLTPEESRRRLGVIVDRIDENKDGSVTLAELKNWIAYTQRRYIEEDVGRVWKQHNPDN--NETIS 133
            .||||:|:.:|..:|.::|.:.||.:...|||:.|.:.|:||:..||.|.||.:..:.  :..|.
 Worm    55 ELTPEKSKEKLAKLVPKMDADSDGFIEENELKDHINFMQKRYVNNDVDRTWKNYKAEKIVDGKIK 119

  Fly   134 WDSYMQTVYGFMD----DLSPDEKEQEENGVSYKSLLKRDRYRWSVADQDLDDNLTKDEFTAFLH 194
            |:.|.:.|||..|    :|||:          |..::.||..||:|||.|.:..|.:.|:..|:|
 Worm   120 WEDYREMVYGSADGAGQELSPE----------YAKMIARDEKRWAVADYDSNGALDRTEYGCFMH 174

  Fly   195 PEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGDMYRSTGAED---EEPEWVANEREAFSTHRD 256
            |||...|:.||:.||:.|:||:.||.:.:|||||||||.....:   :||:||.:|||.|..|||
 Worm   175 PEDCDHMRDVVVAETVDDIDKNKDGSVDLDEYIGDMYRPDDYPELNGKEPDWVQSEREMFKEHRD 239

  Fly   257 LDKDGYLNEEEVKQWIAPHDFDHSEAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGE 321
            .|.||.||:||::.||.|..|||:||||:||:..||.:.|.||..:||:..||.||||||||:||
 Worm   240 KDGDGKLNQEEMRDWIMPVGFDHAEAEARHLVGIADDNKDGKLNLDEIVAHYDTFVGSQATDYGE 304

  Fly   322 ALARHD 327
            .|.:||
 Worm   305 QLQKHD 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scfNP_477392.1 EF-hand_7 170..227 CDD:290234 25/56 (45%)
EFh 206..273 CDD:238008 35/69 (51%)
EF-hand_7 248..308 CDD:290234 32/59 (54%)
EFh 248..306 CDD:298682 32/57 (56%)
calu-1NP_001370866.1 EFh_CREC_Calumenin_like 29..296 CDD:320024 121/276 (44%)
EF-hand motif 29..57 CDD:320024 14/27 (52%)
EF-hand motif 64..93 CDD:320024 9/28 (32%)
EF-hand motif 100..131 CDD:320024 11/30 (37%)
EF-hand motif 148..177 CDD:320024 13/28 (46%)
EF-hand motif 185..214 CDD:320024 17/28 (61%)
EF-hand motif 230..259 CDD:320024 17/28 (61%)
EF-hand motif 266..295 CDD:320024 13/28 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159327
Domainoid 1 1.000 74 1.000 Domainoid score I5959
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H936
Inparanoid 1 1.050 271 1.000 Inparanoid score I1818
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48619
OrthoDB 1 1.010 - - D372250at33208
OrthoFinder 1 1.000 - - FOG0000638
OrthoInspector 1 1.000 - - oto17336
orthoMCL 1 0.900 - - OOG6_105526
Panther 1 1.100 - - LDO PTHR10827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3115
SonicParanoid 1 1.000 - - X1088
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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