DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rabex-5 and SAP10

DIOPT Version :10

Sequence 1:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_194268.1 Gene:SAP10 / 828641 AraportID:AT4G25380 Length:130 Species:Arabidopsis thaliana


Alignment Length:25 Identity:13/25 - (52%)
Similarity:17/25 - (68%) Gaps:0/25 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LKCRSGCGFYGTPQNEGLCSMCFRE 41
            |.|..|||.|||..|..|||:|:::
plant     8 LPCEGGCGLYGTRVNNNLCSLCYKK 32

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rabex-5NP_612093.1 zf-A20 17..40 CDD:460313 13/22 (59%)
DUF5601 163..220 CDD:465668
VPS9 274..373 CDD:460489
SAP10NP_194268.1 zf-A20 8..31 CDD:460313 13/22 (59%)
ZnF_AN1 71..108 CDD:197545
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.