DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rabex-5 and AT4G22820

DIOPT Version :10

Sequence 1:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_194013.1 Gene:AT4G22820 / 828381 AraportID:AT4G22820 Length:176 Species:Arabidopsis thaliana


Alignment Length:22 Identity:13/22 - (59%)
Similarity:16/22 - (72%) Gaps:0/22 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CRSGCGFYGTPQNEGLCSMCFR 40
            |..||||:|:|.|..|||.|:|
plant    22 CVKGCGFFGSPSNMDLCSKCYR 43

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rabex-5NP_612093.1 zf-A20 17..40 CDD:460313 12/20 (60%)
DUF5601 163..220 CDD:465668
VPS9 274..373 CDD:460489
AT4G22820NP_194013.1 zf-A20 20..43 CDD:460313 12/20 (60%)
ZnF_AN1 117..154 CDD:197545
Blue background indicates that the domain is not in the aligned region.

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