DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rabex-5 and Rin2

DIOPT Version :10

Sequence 1:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001393437.1 Gene:Rin2 / 74030 MGIID:1921280 Length:903 Species:Mus musculus


Alignment Length:454 Identity:95/454 - (20%)
Similarity:175/454 - (38%) Gaps:123/454 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TAARP-------PSLRLGQQDLKCRSGCGFYGTPQNE--GLCSMCFREKFNDKQRKLKQTGGETG 58
            ||.||       |.|.|   :|:..:.....|.|..:  |.|:            :....|.|:.
Mouse   378 TARRPSRRSEPEPELEL---ELEMGTAGHAGGAPPRDAPGDCT------------RAPPPGSESQ 427

  Fly    59 P----------------GSSSSVATLDRRSPQHAH----------LQGKVEQQVRKPSDKEQDNL 97
            |                .|||.....||..|.:.:          .:|:.:|:...|..|.:   
Mouse   428 PPPCHGARQRLSDMSLSTSSSDSLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSK--- 489

  Fly    98 GTLQKKKFTAVLQKTLQAGAQKITQQRGHVPDPTEGQFLLQLRQLRIPDDGKRKLK--LEIQR-- 158
               :|:..:.||.|.:::..:|::           |.|    .....|:  ||.::  .|:.|  
Mouse   490 ---KKRNSSFVLPKLVKSQLRKMS-----------GVF----SSFMTPE--KRMVRRIAELSRDK 534

  Fly   159 ------LDSDIRKYMNGNGG---------KNINELSDLVQNAYTKVSDIVHNDPSFEIATNEDRD 208
                  |..|...::..|..         :.|.:....|:|..::.|::   ||..|....||:.
Mouse   535 CTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYLSQSSEL---DPPIESLIPEDQI 596

  Fly   209 SAIDFFEKVVMTQNHKFLFSPY----------FTTDEDSDVKVQKRIRQLSWITAKHLDC---SI 260
            ..:  .||.:    ||.:..|.          |.|.:.|..::::.::.:.....:.|..   :.
Mouse   597 DVV--LEKAM----HKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVRQRNPQELGVFAPTP 655

  Fly   261 DEVNSEARDLVYNAISELVGIDSYYSPQEKLQCTWRCCRHIFELLKRATGGPASADDFLPALIFV 325
            |.:..|...|.:..:.::      |||::|:....|.|:.|:.:::..:|....||||||.|.:|
Mouse   656 DLMELEKIKLKFMTMQKM------YSPEKKVMLLLRVCKLIYTVMENNSGRMYGADDFLPVLTYV 714

  Fly   326 VLKANPVRLHSNINFVTRFTNASRLMSGESGYYFTNLCSAIAFIENLNGESLG--VSSEEFEAL 387
            :.:.:.:.|.:.|.::....:.| |:.||.|||.|:...|::.|:|...|...  :|||..:.|
Mouse   715 IAQCDMLELDTEIEYMMELLDPS-LLHGEGGYYLTSAYGALSLIKNFQEEQAARLLSSEARDTL 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rabex-5NP_612093.1 zf-A20 17..40 CDD:460313 5/24 (21%)
DUF5601 163..220 CDD:465668 12/65 (18%)
VPS9 274..373 CDD:460489 29/98 (30%)
Rin2NP_001393437.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..73
SH2_RIN2 86..185 CDD:198257
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..455 18/91 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 471..491 4/25 (16%)
Interaction with RAB5B. /evidence=ECO:0000250 506..775 65/301 (22%)
VPS9 659..775 CDD:128469 35/122 (29%)
RA_Rin2 796..886 CDD:340548
Blue background indicates that the domain is not in the aligned region.

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