DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rabex-5 and rin1a

DIOPT Version :10

Sequence 1:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster
Sequence 2:XP_697152.2 Gene:rin1a / 568715 ZFINID:ZDB-GENE-091204-129 Length:811 Species:Danio rerio


Alignment Length:475 Identity:104/475 - (21%)
Similarity:170/475 - (35%) Gaps:116/475 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SSSSVATLD--RRSPQHAHLQGKVEQQVRKPSDKEQDNLGTLQKKKFTAVL------QKTLQAGA 117
            ||:|:::||  ..||:...|.......|..|..|....|     :|.:|..      :|.:....
Zfish   374 SSTSLSSLDEMEESPERPPLVRGTSNPVMPPPKKAMSAL-----RKMSAAFISFFAPEKRVARMV 433

  Fly   118 QKITQQRGHVPDPTEGQFLLQLRQLRIPDDGKRKLKLEIQRLDSDIRKYMNGNGGKNINELSDLV 182
            :.:::.|..........||.|.|:...|    ..|...:|.| .|:|.::| .....:.|..:| 
Zfish   434 EDLSRDRRMAFGALVQDFLRQQREALKP----HCLTSAVQLL-QDLRLFIN-QAKAFLLECGEL- 491

  Fly   183 QNAYTKVSDIVHNDPSFE-IATNEDRDSAIDFFEKVVMTQNHKFLFSPY-------FTTDEDSDV 239
                         :|..| :.|..::|.|:   ||.:.    :.:..|.       ..|....|.
Zfish   492 -------------EPPIETLLTENEKDQAL---EKAMF----RCILKPLKPQIDAALLTLHKQDG 536

  Fly   240 KVQKRIRQLSWITAKHLDCSIDEVNSEARDL--VYNAISELVGIDSY----------YSPQEKLQ 292
            ..|:.:..|....|           :..::|  |...:.:..||:..          |||.:|:.
Zfish   537 SFQRMMDSLQRAKA-----------ASPQNLFGVQAGVPDAQGIEKIKHKLTLMQRAYSPIDKVL 590

  Fly   293 CTWRCCRHIFELLKRATGGPASADDFLPALIFVVLKANPVRLHSNINFVTRFTNASRLMSGESGY 357
            ...:.|:.|::.:|..:|....||||||||.:.::..|...:...:.::.....:|.| :||.||
Zfish   591 LLLQTCKLIYKAMKNKSGQEFGADDFLPALSYAMVLCNMPEILLEVEYMMELLESSWL-TGEGGY 654

  Fly   358 YFTNLCSAIAFIENLNGESLGVSSEEFEALMSGQQPYSTPWESALL--ACESLHLISENMKRMEM 420
            |.|::.::::.|::                    ||...| .:.|.  |.|||...|........
Zfish   655 YLTSVYASLSLIQS--------------------QPEDLP-PNGLTNQARESLKEWSRRRSNETT 698

  Fly   421 LQKRNALISSGITSFEKELIDFQREVTERVDTVIAKAPLNLLPIKTPAFLIGQARAHL----LNE 481
            .||.|.|..    .|.|.|  ||......|.|::.|...|           |:|.|.|    ...
Zfish   699 NQKDNRLHQ----KFVKVL--FQDGDNSVVKTLMWKTAFN-----------GEAMAQLCAVKFGV 746

  Fly   482 SEAGHYQANMLHGGSLTSQS 501
            .:|..|.......|.||..|
Zfish   747 DKAEEYSLYCRRDGVLTPLS 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rabex-5NP_612093.1 zf-A20 17..40 CDD:460313
DUF5601 163..220 CDD:465668 11/57 (19%)
VPS9 274..373 CDD:460489 28/108 (26%)
rin1aXP_697152.2 None
Blue background indicates that the domain is not in the aligned region.

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