Protein Alignment Rabex-5 and gapvd1

DIOPT Version :9

• Sequence 1: NP_612093.1
• Gene: Rabex-5 / 38144
• FlyBaseID: FBgn0262937
• Length: 696
• Species: Drosophila melanogaster
• Sequence 2: XP_009302368.1
• Gene: gapvd1 / 436693
• ZFINID: ZDB-GENE-040718-117
• Length: 1484
• Species: Danio rerio
• Alignment Length: 438
• Identity: 109/438 - (24%)
• Similarity: 182/438 - (41%)
• Gaps: 109/438 - (24%)

  Fly    12 LGQQDLKCRSGCGFYGTPQNEGLCSMCFRE----------------KFNDKQRKLKQTGGETGPG 60
            :||:  .||.|...:.:|::|.|.::...:                .|:|.::||:     ....
Zfish  1077 VGQE--SCREGDSEHDSPKDEALQNISADDLPDSASQTAPPQDKTFSFSDIKKKLR-----LALC 1134

  Fly    61 SSSSV-------ATLDRRSPQHAHLQGKVEQQVRKPSDKE-----QDNLG---TLQKKKFTAVLQ 110
            |:.||       ||.....|.||           .|.|.|     :..|.   .||.|...|.:|
Zfish  1135 SADSVVFPIIPPATTRNGLPDHA-----------DPEDNEIVCFLKVQLAEAINLQDKNQMAQIQ 1188

  Fly   111 KT---------------LQAGAQKITQQRGHVPDPT---EG--------QFLLQLRQLRIPDDGK 149
            :|               |.|.|:...::..::...|   :|        :.||| |.||..:...
Zfish  1189 ETTRCVSHLDPRTCRKLLTAMAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQ-RVLRDKEVAN 1252

  Fly   150 RK-----LKLEIQRLDSDIRKYMNGNGGKNINE-----LSDLVQNAYTKVSDIVHNDPSFEIATN 204
            |.     ::|.::.::|.:..::....|....:     :.|.::..|..::    :|..::.|:.
Zfish  1253 RYFTTVCVRLLLEHMESKMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMA----HDAIWQYASE 1313

  Fly   205 EDRDSAIDFFEKVVMTQNHKFLFSPYFTTDEDSDVKVQKRIRQLS-WITAKHLDCSIDEVNSEAR 268
            |....|....|:.||.:..|..|.|....|...|....:.|::|| .::|.|....|.|
Zfish  1314 EQLQDAQMAIERSVMNRIFKLAFYPNQDGDIHRDELFHEHIQRLSRVVSANHKALQIPE------ 1372

  Fly   269 DLVY-------NAISELVGIDSYYSPQEKLQCTWRCCRHIFELLKRAT-GGPASADDFLPALIFV 325
              ||       :|.:|:..|::|.:|::|:||..|.|..|..||..|. .....||||:|.|:||
Zfish  1373 --VYLKEAPWPSAQAEIKTINAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFV 1435

  Fly   326 VLKANPVRLHSNINFVTRFTNASRLMSGESGYYFTNLCSAIAFIENLN 373
            ::||||..|.|.|.::..| .|||| |||..|::....:|:.||:.::
Zfish  1436 LIKANPPCLLSTIQYINNF-YASRL-SGEECYWWMQFTAAVEFIKTID 1481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rabex-5	NP_612093.1	zf-A20	17..40	CDD:280010	6/22 (27%)
		VPS9	274..373	CDD:280383	41/99 (41%)
gapvd1	XP_009302368.1	RasGAP_RAP6	84..449	CDD:213331
		VPS9	1380..1481	CDD:280383	41/102 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG2319
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D944088at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820