DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rabex-5 and CG15368

DIOPT Version :9

Sequence 1:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_572541.1 Gene:CG15368 / 31861 FlyBaseID:FBgn0030104 Length:162 Species:Drosophila melanogaster


Alignment Length:55 Identity:14/55 - (25%)
Similarity:26/55 - (47%) Gaps:11/55 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TGGETGPGSSSSVAT------LDRRSPQH-----AHLQGKVEQQVRKPSDKEQDN 96
            :|.:.|..|:.|:..      |::|..:.     |..|.:.:||..:|..:|||:
  Fly    13 SGMDAGTQSAMSIQLHGFSHHLEQRDQEERDQGDAQEQQQPQQQQDQPPMEEQDS 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rabex-5NP_612093.1 zf-A20 17..40 CDD:280010
VPS9 274..373 CDD:280383
CG15368NP_572541.1 ZnF_AN1 102..140 CDD:197545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3173
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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