Protein Alignment Rabex-5 and Gapvd1

DIOPT Version :9

• Sequence 1: NP_612093.1
• Gene: Rabex-5 / 38144
• FlyBaseID: FBgn0262937
• Length: 696
• Species: Drosophila melanogaster
• Sequence 2: XP_006234089.1
• Gene: Gapvd1 / 311880
• RGDID: 1307479
• Length: 1484
• Species: Rattus norvegicus
• Alignment Length: 429
• Identity: 102/429 - (23%)
• Similarity: 169/429 - (39%)
• Gaps: 115/429 - (26%)

  Fly     2 STAARPPSLRLGQQDLK-------C--------------RSGCGFYGTPQ-NEGLCSM------- 37
            |.||.|....|..:|:|       |              |:|...:..|: ||.:|.:
  Rat  1111 SQAAHPQDSALSYRDVKKKLRLALCSADSVAFPMLTHSTRNGLPEHTDPEDNEIVCFLKVQIAEA 1175

  Fly    38 -----------------CFREKFNDKQRKLKQTGGETGPGSSSSVATLDR----RSPQHAHLQGK 81
                             |.....|...|||..:..|.....:..:|.|.|    .....|||:..
  Rat  1176 INLQDKSLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERL 1240

  Fly    82 VEQQVRKPSDKEQDNLGTLQKKKFTAVLQKTLQAGAQKITQQRGHVPDPTEGQFLLQLRQLRIPD 146
            :::.:|   |||..|      :.||.|..:.|....:|..:           :|:...::|...|
  Rat  1241 LQRVLR---DKEVAN------RYFTTVCVRLLLESKEKKIR-----------EFIQDFQKLTAAD 1285

  Fly   147 DGKRKLKLEIQRLDSDIRKYMNGNGGKNINELSDLVQNAYTKVSDIVHNDPSFEIATNEDRDSAI 211
            |                          ...::.|.:|..|..::    .|..::.|:.|....|.
  Rat  1286 D--------------------------KTAQVEDFLQFLYGAMA----QDVIWQNASEEQLQDAQ 1320

  Fly   212 DFFEKVVMTQNHKFLFSPYFTTDEDSDV----KVQKRIRQLS-WITAKHLDCSIDEVNSEARDLV 271
            ...|:.||.:..|..|.|    ::|.|:    .:.:.|::|| .:||.|....|.||  ..|:..
  Rat  1321 LAIERSVMNRIFKLAFYP----NQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEV--YLREAP 1379

  Fly   272 Y-NAISELVGIDSYYSPQEKLQCTWRCCRHIFELLKRAT-GGPASADDFLPALIFVVLKANPVRL 334
            : :|.||:..|.:|.:|::|:||..|.|..|..||..|. .....||||:|.|:||::||||..|
  Rat  1380 WPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCL 1444

  Fly   335 HSNINFVTRFTNASRLMSGESGYYFTNLCSAIAFIENLN 373
            .|.:.:::.|  .:..:|||..|::....:|:.||:.::
  Rat  1445 LSTVQYISSF--YASCLSGEESYWWMQFTAAVEFIKTID 1481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rabex-5	NP_612093.1	zf-A20	17..40	CDD:280010	9/68 (13%)
		VPS9	274..373	CDD:280383	37/99 (37%)
Gapvd1	XP_006234089.1	RasGAP_RAP6	84..449	CDD:213331
		VPS9	1380..1481	CDD:280383	37/102 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG2319
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D944088at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820