DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rabex-5 and Zfand3

DIOPT Version :9

Sequence 1:	NP_612093.1	Gene:	Rabex-5 / 38144	FlyBaseID:	FBgn0262937	Length:	696	Species:	Drosophila melanogaster
Sequence 2:	NP_001343194.1	Gene:	Zfand3 / 21769	MGIID:	1096572	Length:	227	Species:	Mus musculus

Alignment Length:	103	Identity:	29/103 - (28%)
Similarity:	40/103 - (38%)	Gaps:	21/103 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 STAARPPSLRLGQQDLKCRSGCGFYGTPQNEGLCSMCFREKFNDKQRKLKQT-----------GG 55
            |..::.||       |..|..|||:|:.:...|||.||.: |..||.....|           ..
Mouse     6 SERSKAPS-------LPPRCPCGFWGSSKTMNLCSKCFAD-FQKKQPDDDSTPSTSNSQSDLFSE 62

  Fly    56 ETGPGSSSSVATLDRRSPQHAHLQGKVEQQVRKPSDKE 93
            ||...::::..|....||....|  ..|..|..||.:|
Mouse    63 ETTSDNNNTSVTTPTLSPSQQSL--PTELNVTSPSTEE 98

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rabex-5	NP_612093.1	zf-A20	17..40	CDD:280010	10/22 (45%)
Rabex-5	NP_612093.1	VPS9	274..373	CDD:280383
Zfand3	NP_001343194.1	zf-A20	<19..36	CDD:366793	7/16 (44%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	41..99		14/60 (23%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	113..151
		zf-AN1	<174..194	CDD:376545
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3173
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810