Protein Alignment Rabex-5 and rabx-5

DIOPT Version :10

• Sequence 1: NP_612093.1
• Gene: Rabex-5 / 38144
• FlyBaseID: FBgn0262937
• Length: 696
• Species: Drosophila melanogaster
• Sequence 2: NP_001360492.1
• Gene: rabx-5 / 176481
• WormBaseID: WBGene00012644
• Length: 520
• Species: Caenorhabditis elegans
• Alignment Length: 599
• Identity: 153/599 - (25%)
• Similarity: 252/599 - (42%)
• Gaps: 157/599 - (26%)

  Fly    10 LRLGQQDLKCRSGCGFYGTPQNEGLCSMCFRE------------------KFNDKQRKLKQT--- 53
            :.|...||.|.:|||||||||.|..||.|:|.                  .|:..|.:.|.|
 Worm    14 MHLKANDLLCVNGCGFYGTPQWENRCSKCWRAHQNEMKKCQDFAKNRSLLSFDQFQERRKSTTES 78

  Fly    54 ----------------GGETGPGSSSSVATLDRRSPQHAHLQGKVEQQVRKPSDKEQDNLGTLQK 102
                            ||.:.|.|:|..:|..|.|          .::...|...|       .:
 Worm    79 KSRGIKNLFKTSPIPEGGTSSPTSTSPASTPTRHS----------RRRELSPDSLE-------AR 126

  Fly   103 KKFTAVLQKTLQAG-AQKITQQRGHVPDPTEGQFLLQLRQLRIPDDGKRKLKLEIQRLDSDIRKY 166
            ::||..|...|..| ||:|.:...:..:                       |:...|:.||
 Worm   127 QQFTDFLVANLSTGMAQEIARSVKNAVN-----------------------KISEMRMSSD---- 164

  Fly   167 MNGNGGKNINELSDLVQNAYTKVSDIVHNDPSFEIATNEDR-DSAIDFFEKVVMTQNHKFLFSPY 230
                      ::|:||.:.|..:.:.:.....|:....:.: :..:|..||.:.|    |.:|.:
 Worm   165 ----------DMSELVMSYYQYLGERIGGHSLFDSPDCKVKVEDVMDQVEKYIST----FCYSIF 215

  Fly   231 FTT---DEDSDVKVQKRIRQLSWITAKHLDCSIDEVNSEARDLVYNAISELVGIDSYYSPQEKLQ 292
            |..   :|.:|:.:|.|||.|.|:||..|:..:.......||.:..|||||:.|::..|..|||.
 Worm   216 FCANHEEEVADMSLQDRIRSLHWVTAGFLETKMVFKKQTVRDKIDEAISELIEINAKRSAFEKLD 280

  Fly   293 CTWRCCRHIFELLKRATGGPASADDFLPALIFVVLKANPVRLHSNINFVTRFTNASRLMSGESGY 357
            |..:.|:.|||.||.:... .|||:|||.||:|:.:.||..:.||:.|::||...:||||||:.|
 Worm   281 CLTKSCKAIFEALKESEAS-TSADEFLPTLIYVLFRGNPPLIQSNVKFISRFAIPARLMSGEAAY 344

  Fly   358 YFTNLCSAIAFIENLNGESLGVSSEEFEALMSGQQPYSTPWESALLAC-ESLHLISENMKRMEML 421
            :||||..|:.|..|:|.|||.:...||||..||.  .:.|......|| ::::::...::.:..:
 Worm   345 FFTNLSCALEFARNMNHESLQMEKSEFEAYTSGH--LAPPLSVINSACNQAIYVLEGTIETITNV 407

  Fly   422 QKRNALISSGITSFE--------------KELIDF--QREVTERVDTVIAKAPLNLLPIKTPAFL 470
            .|:...::..:|:..              ||.:||  ..|......::.|:..      :|...|
 Worm   408 AKKAGSLAKNLTNMHGKSDDDLEKMLAVIKETVDFYPTDEYMNMKQSIFAEEK------ETADIL 466

  Fly   471 IGQARAHLLNESEAGHYQANMLHGGSLTSQSLTAAGGLVKPAAASKESGL------SLKDTSMSS 529
            :..:|    ..||:|.        |:||.         .:|:....::.|      .::..:::|
 Worm   467 VSLSR----QSSESGR--------GTLTD---------TQPSTPQPDTSLESPLIAEIQAINLTS 510

  Fly   530 MGRLSPLQQNVQPA 543
            .|.    |::|:.|
 Worm   511 SGN----QEHVEEA 520

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rabex-5	NP_612093.1	zf-A20	17..40	CDD:460313	15/22 (68%)
		DUF5601	163..220	CDD:465668	8/57 (14%)
		VPS9	274..373	CDD:460489	47/98 (48%)
rabx-5	NP_001360492.1	zf-A20	21..44	CDD:460313	15/22 (68%)
		DUF5601	147..212	CDD:465668	14/105 (13%)
		VPS9	259..361	CDD:460489	47/102 (46%)