Protein Alignment Rabex-5 and rin1b

DIOPT Version :9

• Sequence 1: NP_612093.1
• Gene: Rabex-5 / 38144
• FlyBaseID: FBgn0262937
• Length: 696
• Species: Drosophila melanogaster
• Sequence 2: XP_005166367.1
• Gene: rin1b / 101882011
• ZFINID: ZDB-GENE-121001-4
• Length: 722
• Species: Danio rerio
• Alignment Length: 618
• Identity: 123/618 - (19%)
• Similarity: 212/618 - (34%)
• Gaps: 184/618 - (29%)

  Fly    34 LCSMCF------------------REKFNDKQRKLK-QTGGETGPGSSSSVATLDRRSPQHAHLQ 79
            |.|.||                  |.:|   :|.|: :...||....|...:.|   :|...|.|
Zfish   158 LISPCFVNPLFLQPPQPSRTASHKRHRF---KRSLRIRVSNETSLSLSGGESEL---NPGETHGQ 216

  Fly    80 GKVEQQVRKPSDKEQDNLGTLQKKKFTAVLQKTLQAGAQKITQQRGHVP----------DPTEGQ 134
                       :.|:...|.|...:.|..|..|.:   ::..|..|.:|          ||.:|:
Zfish   217 -----------NSERRRTGGLSVLRRTPALTPTSE---EEDEQMLGQIPPSNSLPQLNKDPEDGE 267

  Fly   135 FLLQLRQLRIP-----DDGKRKLKLEIQRLDSDI----------RKYMNGNGGKNINELSDLVQN 184
            ..|.|.:.|.|     |.......||.:....|:          .::.:.|....:..::.....
Zfish   268 VCLALERTRAPSLAELDSNSSFSSLEEEDTQVDLAHQWPPAARGTRFPSANPTSTLRRMTAAFVC 332

  Fly   185 AYT---KVSDIVHNDPSFEIATNEDRDSAI-----DFFEK-------------VVMTQN-HKFL- 226
            .:.   :|:.:|..       .:.||.|..     ||.||             |.|.|. .:||
Zfish   333 VFAPERRVARLVDE-------LSRDRRSTFGSLVQDFLEKKRQEMEASVHSSAVEMLQGMRRFLT 390

  Fly   227 -----------FSPYFTT---DEDSDVKVQKRI-----------RQLSWITAKHLDCSIDEVNSE 266
                       ..|...|   :.:.|:.::|.:           .|.:.::....|.|:..|...
Zfish   391 QAKSLLLEAGEIEPPIETLVPENEKDLALEKALFGCVLKPLKVQLQQTLVSLHTRDGSLQRVTES 455

  Fly   267 -----------------ARDL--VYNAISELVGIDSYYSPQEKLQCTWRCCRHIFELLKRATGGP 312
                             ..|:  |..|.::|:.:...:||.:|:....:.|:.:::.:....|..
Zfish   456 LLAHQEGALERLAVRVGVLDVRGVERAKAKLMLMQRSHSPIDKVLLLLQVCKSVYKAMGTQPGQD 520

  Fly   313 ASADDFLPALIFVVLKANPVRLHSNINFVTRFTNASRLMSGESGYYFTNLCSAIAFIENLNG--E 375
            ..:|||||||.:|:::.|..:|.....::......|.| :||.|||.|::.:::..|::..|  .
Zfish   521 VGSDDFLPALSYVLIQCNIPQLLLETEYMMELLEPSWL-TGEGGYYLTSVYASLCLIQSKPGTTP 584

  Fly   376 SLGVSSEEFEALMSGQQPYSTPWESALLACESLHLISENMKRMEMLQKRNALISSGITSFEKELI 440
            :.|:::|        .|.|...|....         .:..|..:..|.:...:.          |
Zfish   585 TSGLTNE--------AQEYLREWSRRR---------GQEAKTHKDTQLKQRFVR----------I 622

  Fly   441 DFQREVTERVDTVIAKAPLNLLPIKTPAFLIGQARAHLLNESEAGHYQANMLHGGSLTSQSLTAA 505
            .||.|:...|.|::.||..|:       ..:.|:.|.|...||..||.....:.|.:  :.|.|.
Zfish   623 LFQDEIRSGVRTLLWKAGENV-------DALAQSCAALFGVSEPQHYCLFWRNEGEM--RPLPAH 678

  Fly   506 GGLVKPAAASKESGLSL----KDTSMSSMGRLS 534
               |:|.......|.||    .|...|.|.||:
Zfish   679 ---VQPHQLGTHEGASLSYLRSDHDFSKMRRLT 708

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rabex-5	NP_612093.1	zf-A20	17..40	CDD:280010	4/23 (17%)
		VPS9	274..373	CDD:280383	26/98 (27%)
rin1b	XP_005166367.1	SH2	11..106	CDD:301589
		VPS9	479..578	CDD:302927	27/99 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170584035
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840