DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rabex-5 and LOC100498468

DIOPT Version :10

Sequence 1:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster
Sequence 2:XP_031747412.1 Gene:LOC100498468 / 100498468 XenbaseID:XB-GENE-29084247 Length:477 Species:Xenopus tropicalis


Alignment Length:472 Identity:142/472 - (30%)
Similarity:228/472 - (48%) Gaps:77/472 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CRSGCGFYGTPQNEGLCSMCFREKFNDKQRKLKQTGGETGP---GSSSSVATLDRRSPQHAHLQG 80
            ||..||:||.|...|.||.|:   .:::|::      :|.|   |......||..:|        
 Frog    47 CRKNCGYYGNPAWHGYCSRCW---IHERQKR------QTSPLTDGFRHHTGTLFMKS-------- 94

  Fly    81 KVEQQVRKPSDKEQDNLGTLQKKKFTA--VLQKTLQAGAQKITQQRGHVP------DP------- 130
                        |::|...|.:.:.||  |...|....||.......:.|      ||       
 Frog    95 ------------ERENTSDLGQNENTARVVTINTDTMYAQHSQSSYRYFPTTDVTADPRCFIPWS 147

  Fly   131 -----TEGQFLLQLRQLRIPDDGKRKLKLEIQRLDSD----IRKYMNGNGGKNI--NELSDLVQN 184
                 .:..|...|:.||.|         |.|:|::.    |::..|   .||:  |.:.:.:|:
 Frog   148 SLESMAKRDFSDFLKALRRP---------EAQQLNAQCTNLIQRLQN---AKNLTPNTMGEQIQD 200

  Fly   185 AYTKVSDIVHNDPSFEIATNEDRDSAIDFFEKVVMTQNHKFLFSPYFTTDEDSDVKVQKRIRQLS 249
            .|.:::|      .|.....|:|...:|..||:|||:.::.:|....:|||..|:.:|:||:.|.
 Frog   201 FYHRIAD------QFPDHMTEERGYFLDNIEKLVMTRLYRSVFCLDGSTDEQKDLLLQRRIKSLK 259

  Fly   250 WITAKHLDCSIDEVNSEARDLVYNAISELVGIDSYYSPQEKLQCTWRCCRHIFELLKRATGGPAS 314
            |:|.|.|...:||...|.:|...:|::.::.:||..:||:||.|..|....:|:.::.:...||:
 Frog   260 WVTPKMLQVPLDETIVEVKDWTLSAVTAMLEMDSRRAPQDKLTCVSRASNCLFKSIRASKKDPAT 324

  Fly   315 ADDFLPALIFVVLKANPVRLHSNINFVTRFTNASRLMSGESGYYFTNLCSAIAFIENLNGESLGV 379
            |||||..||::.|:|||.||.||:.::|||.|..||.:||.||.|||||.|::|||||:..||.:
 Frog   325 ADDFLSCLIYITLRANPPRLFSNLEYLTRFCNPVRLTTGEWGYCFTNLCCAVSFIENLDASSLSL 389

  Fly   380 SSEEFEALMSGQQPYSTPWESALLACESLHLISENMKRMEMLQKRNALISSGITSFEKELIDFQR 444
            :.|||:.||. |.......::::....:|..:..|.|.:..||.|...:.......||||..:.:
 Frog   390 TQEEFDCLMK-QHKTELSTQNSVAQQSTLQQMQHNKKLLAELQHRQDNLIQRAEVLEKELRAWPQ 453

  Fly   445 EVTERVDTVIAKAPLNL 461
            .:...|..:|.:.||::
 Frog   454 LIHGEVKEIIRRYPLDI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rabex-5NP_612093.1 zf-A20 17..40 CDD:460313 11/20 (55%)
DUF5601 163..220 CDD:465668 15/58 (26%)
VPS9 274..373 CDD:460489 47/98 (48%)
LOC100498468XP_031747412.1 zf-A20 46..67 CDD:460313 10/19 (53%)
DUF5601 175..233 CDD:465668 17/66 (26%)
VPS9 283..383 CDD:460489 47/99 (47%)
Lebercilin 399..>462 CDD:464776 12/63 (19%)

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