Sequence 1: | NP_612093.1 | Gene: | Rabex-5 / 38144 | FlyBaseID: | FBgn0262937 | Length: | 696 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012818164.1 | Gene: | rin2 / 100144744 | XenbaseID: | XB-GENE-484799 | Length: | 881 | Species: | Xenopus tropicalis |
Alignment Length: | 489 | Identity: | 96/489 - (19%) |
---|---|---|---|
Similarity: | 183/489 - (37%) | Gaps: | 139/489 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 61 SSSSVATLDRRSPQHAHLQGKVEQQVRKPSDKE--QDNLGTLQKKKFTAVLQKTLQAGAQKITQQ 123
Fly 124 RGHVPDPTEGQFLLQLRQLRIPDDGKRKLKLEIQRLDSDIRKYMNGNGGKNINE-LSDLVQNAYT 187
Fly 188 KVS--DIVHN------------------DPSFEIATNEDRDSAIDFFEKVVMTQNHKFLFSPYFT 232
Fly 233 TDEDSDVKVQKRIRQLSWITAKH----------LDCSIDEVNSEARDLVYNAISELVGIDSYYSP 287
Fly 288 QEKLQCTWRCCRHIFELLKRATGGPASADDFLPALIFVVLKANPVRLHSNINFVTRFTNASRLMS 352
Fly 353 GESGYYFTNLCSAIAFIEN---------LNGES--------------------------LGVSSE 382
Fly 383 EFEALMSGQ----QPYSTPWESALLAC-------------------ESLHLISEN---------- 414
Fly 415 -----MKRMEMLQKRNALISSGITSFEKELIDFQ 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rabex-5 | NP_612093.1 | zf-A20 | 17..40 | CDD:280010 | |
VPS9 | 274..373 | CDD:280383 | 28/107 (26%) | ||
rin2 | XP_012818164.1 | SH2_RIN2 | 82..181 | CDD:198257 | |
VPS9 | 636..752 | CDD:128469 | 32/117 (27%) | ||
RA_Rin2 | 773..863 | CDD:340548 | 13/90 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |