DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and asgrl3

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021332405.1 Gene:asgrl3 / 799269 ZFINID:ZDB-GENE-060526-152 Length:311 Species:Danio rerio


Alignment Length:226 Identity:59/226 - (26%)
Similarity:94/226 - (41%) Gaps:49/226 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 ERDQQPLANQEDFDY--------DVQESLQSVESE-QHDQYYGNIFHRDP--------SENEVDN 222
            |.:||.|..|::..|        .|:.|:.|:.|: :.|....:...|.|        |..|:::
Zfish   108 EENQQKLERQQNVSYIQVKKQMDTVRASVSSIMSKLKADSVRTSFMFRHPLERFLIEHSSEELES 172

  Fly   223 DCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFF--KANWFKATQYCRYHGMHLASISSQEENDR 285
            .|    .:|.:.|         .|...|   :|.  |.||.:|..||...|..|..|....|::.
Zfish   173 GC----SDSAWVP---------FGNSCY---LFSRDKMNWTEAKDYCEEKGAWLLKIEDDSEDEW 221

  Fly   286 LE---KHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFT--NWNAGEPNNF-RYENGEE-E 343
            :.   :.:.||. ...|:||..|| .:.|.:.| |.|...|..  :|..|:|:.: .:..||| |
Zfish   222 VRNECQFVTDFA-NPTHYWIGLTD-QNTGQWRW-ADGTNYTMNKEHWGPGQPDEWTEHSLGEEGE 283

  Fly   344 NCLELWNRDGKGLKWNDSPCSFETYFVCEVQ 374
            :|.|:....    ..||..||.:..|:||::
Zfish   284 DCAEITYES----LLNDLHCSSKIKFICEMK 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 39/132 (30%)
asgrl3XP_021332405.1 CLECT_DC-SIGN_like 179..309 CDD:153060 41/148 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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