DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and si:ch211-225k7.2

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_003198916.1 Gene:si:ch211-225k7.2 / 793018 ZFINID:ZDB-GENE-060503-782 Length:361 Species:Danio rerio


Alignment Length:129 Identity:40/129 - (31%)
Similarity:52/129 - (40%) Gaps:27/129 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 NWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWI----SGTDLADEGNFFWMATG 319
            ||..|..|||.:.:.|.|:.:|.||.:||..|.|........||    .....:|:..:      
Zfish   137 NWRDAQSYCRQNHIDLVSVRNQNENQQLENFINDRNSSGSAVWIGLFRDSWQWSDQSTY------ 195

  Fly   320 RPITFTNWNAGEPNNFRYENGEEENCLELW-NRDGKGLKWNDSPCSFETYFVCE------VQPN 376
               :|:.||..||||.    |..|||..|. |..|   .|.|..|..:..|||.      :|.|
Zfish   196 ---SFSYWNNQEPNNV----GGNENCTVLMENTQG---HWADISCDRQFPFVCHEDKLIVIQQN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/124 (31%)
si:ch211-225k7.2XP_003198916.1 CLECT 23..124 CDD:470576
CLECT_1 127..239 CDD:153072 37/117 (32%)
CLECT 245..359 CDD:153057 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

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