DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and COLEC11

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001242914.1 Gene:COLEC11 / 78989 HGNCID:17213 Length:285 Species:Homo sapiens


Alignment Length:154 Identity:43/154 - (27%)
Similarity:67/154 - (43%) Gaps:12/154 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 EVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEEN 283
            |:||.......|.::..|  .:..::..|.:.||.:..:..:..|...|:..|..|:....:..|
Human   138 EMDNQVSQLTSELKFIKN--AVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAAN 200

  Fly   284 DRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLEL 348
            ..:..::...||.  ..:|...||..||.|.:.......||..|.:||||| .|   :||:|:|:
Human   201 GLMAAYLAQAGLA--RVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNN-AY---DEEDCVEM 259

  Fly   349 WNRDGKGLKWNDSPCSFETYFVCE 372
            ....|    |||..|....||:||
Human   260 VASGG----WNDVACHTTMYFMCE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/124 (30%)
COLEC11NP_001242914.1 Collagen 58..111 CDD:189968
CLECT_collectin_like 165..280 CDD:153061 37/125 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4956
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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