DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Colec11

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001300907.1 Gene:Colec11 / 71693 MGIID:1918943 Length:278 Species:Mus musculus


Alignment Length:158 Identity:45/158 - (28%)
Similarity:66/158 - (41%) Gaps:14/158 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 EVDNDCPNCVDESQYTPNKWTMPLLKLG----EKRYYLGIFFKANWFKATQYCRYHGMHLASISS 279
            |:||.......|.::..|....|....|    |.:.||.:..:..:..|...|:..|..|:....
Mouse   125 EMDNQVTQLTTELKFIKNALPSPAAVAGVRETESKIYLLVKEEKRYADAQLSCQARGGTLSMPKD 189

  Fly   280 QEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEEN 344
            :..|..:..::...||.  ..:|...||..||.|.:.......||..|.:||||| .|   :||:
Mouse   190 EAANGLMASYLAQAGLA--RVFIGINDLEKEGAFVYSDRSPMQTFNKWRSGEPNN-AY---DEED 248

  Fly   345 CLELWNRDGKGLKWNDSPCSFETYFVCE 372
            |:|:....|    |||..|....||:||
Mouse   249 CVEMVASGG----WNDVACHITMYFMCE 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/124 (30%)
Colec11NP_001300907.1 Collagen 48..99 CDD:460189
CLECT_collectin_like 158..273 CDD:153061 37/125 (30%)
Blue background indicates that the domain is not in the aligned region.

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