DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec4b1

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001177239.1 Gene:Clec4b1 / 69810 MGIID:1917060 Length:209 Species:Mus musculus


Alignment Length:162 Identity:47/162 - (29%)
Similarity:71/162 - (43%) Gaps:37/162 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 NCVDESQYT--PNKWTMPLLKLGEKRYYL--GIFFKANWFKATQYCRYHGMHLASISSQEEND-- 284
            |.|.:..::  |..|     ||.....||  .:|..|:|.|:.:.|...|.||..|.||||.|  
Mouse    68 NMVSDKVWSCCPKDW-----KLFGSHCYLVPTVFSSASWNKSEENCSRMGAHLVVIHSQEEQDFI 127

  Fly   285 --RLEKHIRDF-GL---GHEHF-WISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEE 342
              .|:.|...| ||   ||..: |:..|...:.           :||  |:.|||::      :.
Mouse   128 TGILDIHAAYFIGLWDTGHRQWQWVDQTPYEES-----------VTF--WHNGEPSS------DN 173

  Fly   343 ENCLELWNRDGKGLKWNDSPCSFETYFVCEVQ 374
            |.|:.::.|...|..|||..|:.:...||:::
Mouse   174 EKCVTVYYRRNIGWGWNDISCNLKQKSVCQMK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 41/134 (31%)
Clec4b1NP_001177239.1 CLECT_DC-SIGN_like 78..204 CDD:153060 45/149 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840881
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFQ9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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