DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Reg4

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_080604.2 Gene:Reg4 / 67709 MGIID:1914959 Length:157 Species:Mus musculus


Alignment Length:137 Identity:39/137 - (28%)
Similarity:57/137 - (41%) Gaps:31/137 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 YY----LGIFFK-ANWFKATQYCRYH--GMHLASISSQEENDRLEKHIRDFGLGHEH---FWISG 304
            ||    .|.|.| .||..|...|:.:  |.||||:.:|:|...:.|:|    .|::.   .||..
Mouse    35 YYRSHCYGYFRKLRNWSHAELECQSYGNGSHLASVLNQKEASVISKYI----TGYQRNLPVWIGL 95

  Fly   305 TDLADEGNFFWMATGRPITFTNWNAGEPNNFRYEN----GEEENCLELWNRDGKGLKWNDSPCSF 365
            .|  .:....|          .|..|..|.:|..|    .|..:|.|: |...|.|.||.:.|:.
Mouse    96 HD--PQKKQLW----------QWTDGSTNLYRRWNPRTKSEARHCAEM-NPKDKFLTWNKNGCAN 147

  Fly   366 ETYFVCE 372
            ..:|:|:
Mouse   148 RQHFLCK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 39/137 (28%)
Reg4NP_080604.2 CLECT_REG-1_like 29..155 CDD:153064 39/137 (28%)
Carbohydrate-binding. /evidence=ECO:0000250 97..102 1/6 (17%)
Carbohydrate-binding. /evidence=ECO:0000250 134..136 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFQ9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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