DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and BCAN

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_016857536.1 Gene:BCAN / 63827 HGNCID:23059 Length:956 Species:Homo sapiens


Alignment Length:497 Identity:93/497 - (18%)
Similarity:163/497 - (32%) Gaps:211/497 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QNNHISSSSNISRSGGGNGRDKRGAQLDPSEIARQNQITQQIFANYLERRLFPNRTANQKIPTIA 108
            |.:.|..:||.:.:...:|.:   |.:..:|...:.|:.|:...:       .:|.|...||.:.
Human   403 QPSAIPEASNPASNPASDGLE---AIVTVTETLEELQLPQEATES-------ESRGAIYSIPIME 457

  Fly   109 D-----ILPKPKPSPRPR------------PRGFAASDGGNFKRSGGGAQRNRLAAAASKRQSGY 156
            |     ..|: .|:..||            |.||:..:|                 .|.:.:..|
Human   458 DGGGGSSTPE-DPAEAPRTLLEFETQSMVPPTGFSEEEG-----------------KALEEEEKY 504

  Fly   157 NRKRLREEQEEEEEADDQ----------------ERDQQPLANQEDFDYDVQESLQSV------- 198
            ..:..:||:|||||.:|:                ....:|.|.:|...   |...::|       
Human   505 EDEEEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEESLS---QAPARAVLQPGASP 566

  Fly   199 ------ESEQHDQYYG------------NIFHRDPS-----------------------ENE--- 219
                  |:.:..:.:|            |:....||                       |:|   
Human   567 LPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETG 631

  Fly   220 ----------------------------------------------------------------V 220
                                                                            |
Human   632 SSEGAPSLLPATRAPEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCV 696

  Fly   221 DNDCPN---CVDESQ---------YTPN------KWTMPLLKLGEKRYYLGIFFKANWFKATQYC 267
            .:.|.|   |::|.:         |..:      ::..|.....:...|.....:.:|.:|...|
Human   697 PSPCHNGGTCLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQC 761

  Fly   268 RYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEP 332
            |.:|.||||||:.||.|.:....|      |:.||...|...||:|.| :.|.|:.:.|||.|:|
Human   762 RMYGAHLASISTPEEQDFINNRYR------EYQWIGLNDRTIEGDFLW-SDGVPLLYENWNPGQP 819

  Fly   333 NNFRYENGEEENCLEL-WNRDGKGLKWNDSPCSFETYFVCEV 373
            ::: :.:|  |||:.: |:..|   :|:|.||::...:.|::
Human   820 DSY-FLSG--ENCVVMVWHDQG---QWSDVPCNYHLSYTCKM 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 42/124 (34%)
BCANXP_016857536.1 Ig 84..204 CDD:472250
Ig strand B 98..102 CDD:409353
Ig strand C 121..125 CDD:409353
Ig strand E 165..169 CDD:409353
Ig strand F 179..184 CDD:409353
Ig strand G 197..200 CDD:409353
Link_domain_CSPGs_modules_1_3 202..296 CDD:239594
Link_domain_CSPGs_modules_2_4 303..398 CDD:239597
PRK07764 <544..699 CDD:236090 13/157 (8%)
EGF 695..724 CDD:394967 6/28 (21%)
CLECT 733..856 CDD:470576 43/136 (32%)
CCP 860..917 CDD:153056
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.