DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and REG1B

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_006498.1 Gene:REG1B / 5968 HGNCID:9952 Length:166 Species:Homo sapiens


Alignment Length:116 Identity:29/116 - (25%)
Similarity:50/116 - (43%) Gaps:12/116 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 WFKATQYCR-YHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPIT 323
            |..|..||: .:..:|.|:.:|.|...:...|::......:.||...|......:.| ::|..::
Human    57 WVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESSTDDSNVWIGLHDPKKNRRWHW-SSGSLVS 120

  Fly   324 FTNWNAGEPN--NFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            :.:|:.|.|:  |..|       |..|.:..| ..||.|..|..:..|||:
Human   121 YKSWDTGSPSSANAGY-------CASLTSCSG-FKKWKDESCEKKFSFVCK 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 29/116 (25%)
REG1BNP_006498.1 CLECT 36..164 CDD:413318 29/116 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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