DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and si:dkey-83f18.5

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001093472.1 Gene:si:dkey-83f18.5 / 561255 ZFINID:ZDB-GENE-070705-504 Length:360 Species:Danio rerio


Alignment Length:174 Identity:51/174 - (29%)
Similarity:72/174 - (41%) Gaps:35/174 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 NDCPNCVDESQYTPN-KW-------TMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASIS 278
            |..|:..||..:..| :|       |:..:.....|..:.:..|.||..|..|||.:.:.|.|:.
Zfish    92 NQQPDGKDECAFMRNGEWHDWPCSNTLFFICYNMSRGLVFVDQKMNWTAAQSYCRQNHIDLVSVR 156

  Fly   279 SQEENDRLEKHIRDFGLGHEHFWI----SGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYEN 339
            :|.||.:|||.|..........||    .....:|:.|:         :|:.||.|||||    :
Zfish   157 NQNENQQLEKFINVKNPSGSGIWIGLFRDSWQWSDQSNY---------SFSYWNTGEPNN----S 208

  Fly   340 GEEENC-LELWNRDGKGLKWNDSPCSFETYFVCE------VQPN 376
            |..||| :.|.|..|   .|.|..|..:..|||.      :|.|
Zfish   209 GNNENCTVLLENTHG---HWADISCDRQFPFVCHEDKLIVIQQN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 42/134 (31%)
si:dkey-83f18.5NP_001093472.1 CLECT 23..124 CDD:470576 7/31 (23%)
CLECT_1 127..239 CDD:153072 41/127 (32%)
CLECT 245..357 CDD:153057 2/5 (40%)

Return to query results.
Submit another query.