DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and lectin

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001188329.1 Gene:lectin / 560034 ZFINID:ZDB-GENE-070912-438 Length:152 Species:Danio rerio


Alignment Length:138 Identity:48/138 - (34%)
Similarity:69/138 - (50%) Gaps:23/138 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 KWTMPLLKLGEK--RYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEH 299
            :|:    :.|.:  ||:   ....||..|.:.|:..|.:|.|:.:..|||.|...|.:    .|.
Zfish    27 QWS----RFGSRCFRYF---SVPVNWVTAERNCQLLGGNLVSVQNGMENDFLLSLIPN----SER 80

  Fly   300 FWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLEL-WNRDGKGLKWNDSPC 363
            |:|.|.|..||.|:|| :.|....:|||.:|||||.     ..|:|||: |..|   ..||:.||
Zfish    81 FFIGGYDGEDEENWFW-SEGSSFGYTNWCSGEPNNM-----NTEHCLEINWTSD---RCWNNLPC 136

  Fly   364 SFETYFVC 371
            |.|..::|
Zfish   137 STEQGYIC 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 46/124 (37%)
lectinNP_001188329.1 CLECT 34..146 CDD:153057 46/127 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFQ9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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