DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and acanb

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_068073628.2 Gene:acanb / 559593 ZFINID:ZDB-GENE-100422-16 Length:1373 Species:Danio rerio


Alignment Length:299 Identity:69/299 - (23%)
Similarity:110/299 - (36%) Gaps:79/299 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 RPRGFAASDGGNFKRSGGGAQRNRLAAAASKRQSGYNRKRLREEQEEEEEADD--QERDQQPLAN 183
            ||........|:.:.||.|:           ....|....:........|::|  .|||::....
Zfish  1021 RPTAGTEQGRGSVEISGEGS-----------TPEPYTEDSISVSNSTSHESNDLLPERDEKISVT 1074

  Fly   184 QEDFDYDVQE------------------SLQSVESEQHDQYYGNIFHRDPSENEVDND-C-PN-- 226
            .|.||...:.                  |||..:|..           :||.||...| | ||  
Zfish  1075 MEAFDVTDKSPLITTPTNIPVLTTPSSASLQMPKSTM-----------NPSVNEAPFDPCDPNPC 1128

  Fly   227 -------------CVDESQYTPNKWTMPLLKLGE------KRYYLGIFFKANWFKATQYCRYHGM 272
                         |...|.::....:|.:....|      ...|:....:..|..|.|:|:....
Zfish  1129 GQGLCSLQDGVALCQCHSGFSGENCSMLVQGCAEGWMEFMGSCYIHFDERETWTSAEQHCQELNS 1193

  Fly   273 HLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRY 337
            ||.|||||:|.:.::...:|:.      ||...|...:..|.| ..|.|:.:.||...:|:|: :
Zfish  1194 HLVSISSQQEQEFVKTQAQDYQ------WIGLNDKDVQNEFRW-TDGSPLEYENWRPNQPDNY-F 1250

  Fly   338 ENGEEENC-LELWNRDGKGLKWNDSPCSFETYFVCEVQP 375
            ..||:  | :.:|:.:|   :|||.||::...|.|:..|
Zfish  1251 STGED--CVVMIWHENG---QWNDVPCNYHLPFTCKSGP 1284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/124 (30%)
acanbXP_068073628.2 None

Return to query results.
Submit another query.