DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and si:ch211-225k7.6

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001093462.1 Gene:si:ch211-225k7.6 / 558654 ZFINID:ZDB-GENE-070705-121 Length:359 Species:Danio rerio


Alignment Length:133 Identity:40/133 - (30%)
Similarity:57/133 - (42%) Gaps:36/133 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 NWFKATQYCRYHGMHLASISSQEENDRLEKHIRD---------FGLGHEHFWISGTDLADEGNFF 314
            ||..|..|||.:.:.|.|:.:|.|:.:|||.|.|         .||..:..|      :|:.|: 
Zfish   137 NWRAAQSYCRQNHIDLVSVRNQNESQQLEKFINDSIPSRSDVWIGLFRDWQW------SDQSNY- 194

  Fly   315 WMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE------V 373
                    :|:.||..||||:    |..|||..|  ::.....|.|..|..:..|||.      :
Zfish   195 --------SFSYWNTNEPNNY----GNNENCTVL--KENTNGHWADISCDCQFPFVCHEDKLIVI 245

  Fly   374 QPN 376
            |.|
Zfish   246 QQN 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/128 (30%)
si:ch211-225k7.6NP_001093462.1 CLECT 23..124 CDD:295302
CLECT 127..238 CDD:295302 37/121 (31%)
CLECT 244..356 CDD:153057 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D605458at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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