DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and si:ch211-282j17.10

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001026840.1 Gene:si:ch211-282j17.10 / 557030 ZFINID:ZDB-GENE-041210-283 Length:368 Species:Danio rerio


Alignment Length:128 Identity:40/128 - (31%)
Similarity:55/128 - (42%) Gaps:26/128 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 WFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWI----SGTDLADEGNFFWMATGR 320
            |..|..|||.:.:.|.|:.:|.||.:|||.|.|........||    .....:|:.|        
Zfish   145 WRDAQSYCRQNHIDLVSVRNQNENQQLEKFINDRNSSGSAVWIGLFRDSWQWSDQSN-------- 201

  Fly   321 PITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPC-SFETYFVCE------VQPN 376
             .:|..|:.|||||    .||.:||..:.....:|  |.|.|| :.:..|||.      :|.|
Zfish   202 -SSFRYWDTGEPNN----GGEYDNCTVIGANAQRG--WADVPCDNRQIPFVCHEDKLIVIQQN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/123 (31%)
si:ch211-282j17.10NP_001026840.1 CLECT 24..131 CDD:470576
CLECT_1 134..247 CDD:153072 37/116 (32%)
CLECT 253..365 CDD:153057 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

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