DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and colec10

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001011227.1 Gene:colec10 / 496663 XenbaseID:XB-GENE-945586 Length:275 Species:Xenopus tropicalis


Alignment Length:127 Identity:40/127 - (31%)
Similarity:60/127 - (47%) Gaps:12/127 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 EKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEG 311
            :::||..:..:.|:..|...||..|..||....|..|..:..:|...||  ...:|...|:..|.
 Frog   154 DEKYYYIVREERNYRDALTQCRIRGGTLAMPKDQATNSLIADYISKMGL--FRVFIGINDIEKEK 216

  Fly   312 NFFWMATGRPI-TFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            .|.: |...|: |:::|.|||||    :....|:|:|:.:..    .|||..||...|||||
 Frog   217 QFVY-ADNSPLQTYSSWKAGEPN----DGSGYEDCVEMLSTG----HWNDVDCSLTIYFVCE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 40/125 (32%)
colec10NP_001011227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..76
gly_rich_SclB <45..>99 CDD:468478
CLECT_collectin_like 155..270 CDD:153061 40/126 (32%)
Blue background indicates that the domain is not in the aligned region.

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