DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec10a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_012815686.1 Gene:clec10a / 496661 XenbaseID:XB-GENE-947983 Length:338 Species:Xenopus tropicalis


Alignment Length:146 Identity:41/146 - (28%)
Similarity:66/146 - (45%) Gaps:30/146 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PNKWTMPLLKLGEKRYYLGIFFKAN----WFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGL 295
            |:.|         .|:.|..::.:.    |.:|.:.|.....||..|::::|.:.:      ||:
 Frog   212 PDNW---------HRFTLSCYYVSKSGYPWEEAKKRCEGLSAHLVVINNEDEQEYV------FGI 261

  Fly   296 GHEHF-WISGTDLADEGNFFWMATGRPITFTN--WNAGEPNN-FRYENGEEENCLELWNRDGKGL 356
            ....| ||..||  .||.:.|: .|.|...:.  |.|.:|:| |.:..|..|:|..| :.:|   
 Frog   262 AKGQFTWIGLTD--SEGEWKWL-DGTPYNTSPKFWIADQPDNYFGHGLGGGEDCAHL-HYNG--- 319

  Fly   357 KWNDSPCSFETYFVCE 372
            :|||..||....|:||
 Frog   320 QWNDDHCSRRYRFICE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 39/132 (30%)
clec10aXP_012815686.1 PqiB <91..201 CDD:442245
CLECT_DC-SIGN_like 211..336 CDD:153060 41/146 (28%)
Blue background indicates that the domain is not in the aligned region.

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