DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec4a4

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001005860.1 Gene:Clec4a4 / 474145 MGIID:3624119 Length:236 Species:Mus musculus


Alignment Length:165 Identity:43/165 - (26%)
Similarity:64/165 - (38%) Gaps:39/165 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 NCVDESQYTPNK-WT------MPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEEN 283
            ||:.......:| |:      .|.:   ...|::....||:|.::.:.|.:.|.||..|.||.|.
Mouse    91 NCIKNGSLMEDKVWSCCPKDWKPFV---SHCYFILNDSKASWNESEEKCSHMGAHLVVIHSQAEQ 152

  Fly   284 DRLEKHIRD-----FGL---GHEHF-WISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYEN 339
            |.:..::..     .||   |...: ||..|.......|             |:.||||.     
Mouse   153 DFITSNLNTSAGYFIGLLDAGQRQWRWIDQTPYNKSATF-------------WHKGEPNQ----- 199

  Fly   340 GEEENCLELWNRDGKGLKWNDSPCSFETYFVCEVQ 374
             :.|.|: :.|....|..|||.||..|...||:|:
Mouse   200 -DWERCV-IINHKTTGWGWNDIPCKDEHNSVCQVK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 37/132 (28%)
Clec4a4NP_001005860.1 CLECT_DC-SIGN_like 107..230 CDD:153060 37/145 (26%)

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