DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec4a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001005899.2 Gene:Clec4a / 474143 RGDID:1359662 Length:240 Species:Rattus norvegicus


Alignment Length:170 Identity:45/170 - (26%)
Similarity:72/170 - (42%) Gaps:45/170 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 NCV------DESQYT--PNKWTMPLLKLGEKRYYL----GIFFKANWFKATQYCRYHGMHLASIS 278
            ||:      :|..::  |..|.    ..|...|::    ..:.||:|.::.:.|...|.||..|.
  Rat    91 NCIKNVLLMEEKSWSCCPKNWK----PFGSHCYWVTKHTSTYSKASWNESEKNCFSMGAHLLVIH 151

  Fly   279 SQEENDRLEKHI-RD----FGL---GHEHF-WISGTDLADEGNFFWMATGRPITFTNWNAGEPNN 334
            |:||.|.:...: ||    .||   ||..: |:|.|.......|             |:.|||::
  Rat   152 SKEEQDFITGILNRDAAYFIGLWDSGHRQWQWVSQTPYNASATF-------------WHKGEPSS 203

  Fly   335 FRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCEVQ 374
                  ::|.|: :.|....|..|||.|||.:...||:::
  Rat   204 ------DDEKCV-IINHLNSGWGWNDIPCSGKQQSVCQMK 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 39/136 (29%)
Clec4aNP_001005899.2 ITIM motif 5..10
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..38
CLECT_DC-SIGN_like 107..235 CDD:153060 42/151 (28%)
Blue background indicates that the domain is not in the aligned region.

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