DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-224

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001041207.2 Gene:clec-224 / 4363112 WormBaseID:WBGene00044790 Length:195 Species:Caenorhabditis elegans


Alignment Length:121 Identity:28/121 - (23%)
Similarity:44/121 - (36%) Gaps:24/121 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 ATQYCRYHGMHLASISSQEENDRLEK----------HIRDFGLGHEHFWISGTDLADEGNFFWMA 317
            |.|.|...|.||||..:.:|...::.          .:..|....:..|| |....:.|.:.|: 
 Worm    81 AEQECVELGAHLASFETTDEATSVKNLVLSSPLFSDDLLSFTSSSQETWI-GLSKTNNGAWKWV- 143

  Fly   318 TGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPC-SFETYFVCE 372
            ....:.|||...|...|       ..:|:.: |..|   .|....| |..:.|:|:
 Worm   144 NSSDVDFTNLPDGTTVN-------GASCVSM-NISG---IWQPKECTSTASSFICK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 28/121 (23%)
clec-224NP_001041207.2 CLECT 57..188 CDD:214480 27/119 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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