DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec3a

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001102369.1 Gene:Clec3a / 365009 RGDID:1306295 Length:196 Species:Rattus norvegicus


Alignment Length:125 Identity:33/125 - (26%)
Similarity:59/125 - (47%) Gaps:8/125 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 KRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGN 312
            |:.||......::.:|.:.|...|..|....:.:|.:.|..:.:....|...||:...|:..||.
  Rat    76 KKCYLASEGLKHYHEANEDCISKGGTLVVPRNSDEINALRDYSKRSLPGVNDFWLGINDMVTEGK 140

  Fly   313 FFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            |. ...|..::|.||:..:|:     .|:.|||: |:::..:| ||:|..|.....::||
  Rat   141 FL-DVHGFAVSFLNWDRAQPS-----GGKRENCV-LFSQSAQG-KWSDEACRSSKRYICE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 32/124 (26%)
Clec3aNP_001102369.1 CLECT_tetranectin_like 68..193 CDD:153066 33/125 (26%)

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