DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and vcanb

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_999853.2 Gene:vcanb / 323465 ZFINID:ZDB-GENE-030131-2185 Length:1570 Species:Danio rerio


Alignment Length:268 Identity:65/268 - (24%)
Similarity:104/268 - (38%) Gaps:81/268 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 EQEEEEEADDQERDQQPLANQE----------DFDYDVQESLQSVESEQH--------------- 203
            :.|:.:.|...||  ||...:|          |..|.|:..:  |:.:.|               
Zfish  1218 DYEDMQGASVVER--QPPIREEFTTKKPEVWTDSSYTVESHV--VDLQDHALCSVSVCENGGTCF 1278

  Fly   204 DQYYGNI------FHRDPSENEVD----NDCPN---CVD--------------------ESQYTP 235
            ....||:      |..:..||:||    |.|.|   |:|                    :::...
Zfish  1279 SSRKGNVCVCMPGFSGERCENDVDECQSNPCRNGATCIDGMNSFKCVCLPSYSGSLCEQDTEVCD 1343

  Fly   236 NKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHF 300
            ..|     :..:...|.....:..|..|.:.||..|.||.|:.|.||...:.:      |||::.
Zfish  1344 FGW-----QKFQSHCYKYFTHRRTWEAAERECRLQGGHLTSVLSHEEQLFVNR------LGHDYQ 1397

  Fly   301 WISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENC-LELWNRDGKGLKWNDSPCS 364
            ||...|...:.:|.| ..|.|:.|.||..|:|::| :..||:  | :.:|:..|   :|||.||:
Zfish  1398 WIGLNDKMFDNDFRW-TDGHPMQFENWRDGQPDSF-FSTGED--CVVMIWHESG---QWNDVPCN 1455

  Fly   365 FETYFVCE 372
            :...|.|:
Zfish  1456 YHLTFTCK 1463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 40/125 (32%)
vcanbNP_999853.2 None

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