DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Cd209l1

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_221808.5 Gene:Cd209l1 / 304197 RGDID:1564571 Length:207 Species:Rattus norvegicus


Alignment Length:175 Identity:49/175 - (28%)
Similarity:79/175 - (45%) Gaps:29/175 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 SEQHDQYYGNIFHR-DPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKA 263
            |::|||....:..: |..:..:|:.|..|       |..||     ..:...|....|:..|.::
  Rat    52 SQEHDQQKQRMHQKLDQLKTGLDHLCRPC-------PWDWT-----FFQGNCYFFSTFQKKWKES 104

  Fly   264 TQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLADEGNFFWMATGRPITFTN-W 327
            ...|:..|..|..|.|.||...|::..:..|    :.||..:|..:|..:.|: .|.|:.:.| |
  Rat   105 VIACKDMGAQLVVIKSYEEQSFLQRTSKMKG----NTWIGLSDSQEEDQWLWV-DGSPLQWRNYW 164

  Fly   328 NAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            :||||||.     .:|:|:|.     ....|||..||||.:::|:
  Rat   165 SAGEPNNL-----YDEDCVEF-----SSYGWNDISCSFEKFWICK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 38/125 (30%)
Cd209l1XP_221808.5 CLECT_DC-SIGN_like 80..200 CDD:153060 42/147 (29%)

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