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Protein Alignment tfc and Reg3d
DIOPT Version :9
Sequence 1: | NP_612091.1 |
Gene: | tfc / 38141 |
FlyBaseID: | FBgn0035199 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_038921.2 |
Gene: | Reg3d / 30053 |
MGIID: | 1353426 |
Length: | 175 |
Species: | Mus musculus |
Alignment Length: | 189 |
Identity: | 43/189 - (22%) |
Similarity: | 69/189 - (36%) |
Gaps: | 46/189 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 194 SLQSVESEQHDQYYGNIFHRDPSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRY----YLGI 254
||..|:.|| |:.::.:...:|..|:| .| ||.|
Mouse 20 SLSWVQGEQ-------------SQKKLSSPRISCPQEAQ----------------AYGSYCYLLI 55
Fly 255 FFKANWFKATQYCRYH-GMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLA-----DEGNF 313
.....|..|..:|:.| ..|||.:.:..|...:...:::......:.||...||: :|..:
Mouse 56 LEPQTWANAEIHCQKHFSGHLAFLLTYGEIIFVSSLVKNSLTTFPYIWIGLHDLSLGSLPNENGW 120
Fly 314 FWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
.| ::..|:||.||.. |.:....:| .|..|....|. .||.|..|.....:||:
Mouse 121 KW-SSSDPLTFYNWEI--PPSMSAHHG---YCAALSQASGY-QKWRDYYCDTIFPYVCK 172
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tfc | NP_612091.1 |
CLECT |
249..373 |
CDD:153057 |
34/134 (25%) |
Reg3d | NP_038921.2 |
CLECT |
40..173 |
CDD:295302 |
37/156 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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