DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec4a2

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001005880.1 Gene:Clec4a2 / 297584 RGDID:1359163 Length:235 Species:Rattus norvegicus


Alignment Length:162 Identity:50/162 - (30%)
Similarity:72/162 - (44%) Gaps:27/162 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 NDCPNCVDESQYTPNKWTMPLLK----LGEKRYYLGIFFKANWFKATQYCRYHGMHLASISSQEE 282
            ||. ||......|.:|.....||    .|...|:.....||.|.::.:.|...|.||..|.||:|
  Rat    88 NDL-NCTKNVSLTEDKACSCCLKDWKSFGSYCYFTSTDSKATWDESKEKCSRMGAHLLVIHSQDE 151

  Fly   283 NDRLEKHIRDFGLGHEHFWISGTDLAD--EGNFFWM---ATGRPITFTNWNAGEPNNFRYENGEE 342
            .|.:...:   .:|.::|    ..|:|  |..:.|:   .....:||  |:.|||||      :|
  Rat   152 QDFINTIL---NIGTDYF----IGLSDHSENQWQWIDQTPYNESVTF--WHKGEPNN------KE 201

  Fly   343 ENCLELWNRDGKGLKWNDSPCSFETYFVCEVQ 374
            |.|:.:.:||..|  |||.||......||:|:
  Rat   202 EKCVVINHRDKWG--WNDIPCHDRHKSVCQVK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 40/128 (31%)
Clec4a2NP_001005880.1 CLECT_DC-SIGN_like 107..229 CDD:153060 42/138 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344292
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFQ9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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