DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and Asgr2

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_058885.1 Gene:Asgr2 / 29403 RGDID:2161 Length:301 Species:Rattus norvegicus


Alignment Length:143 Identity:45/143 - (31%)
Similarity:69/143 - (48%) Gaps:24/143 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PNKWTMPLLKLGEKRYYL---GIFFKANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLG 296
            |..|    ::.|...|:.   |:    .|.:|.|||:....||..|:|:||.:.:.||     .|
  Rat   171 PVNW----VEFGGSCYWFSRDGL----TWAEADQYCQMENAHLLVINSREEQEFVVKH-----RG 222

  Fly   297 HEHFWISGTDLADEGNFFWM-ATGRPITFTNWNAGEPNNFR-YENGEEENCLELWNRDGKGLKWN 359
            ..|.||..||  .:|::.|: .|.....|.||...:|:|:: :|.|..|:|.|:.: ||   .||
  Rat   223 AFHIWIGLTD--KDGSWKWVDGTEYRSNFKNWAFTQPDNWQGHEEGGSEDCAEILS-DG---LWN 281

  Fly   360 DSPCSFETYFVCE 372
            |:.|.....:.||
  Rat   282 DNFCQQVNRWACE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 42/129 (33%)
Asgr2NP_058885.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Lectin_N 4..162 CDD:461106
CLECT_DC-SIGN_like 170..295 CDD:153060 45/143 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.