DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Clec4a2

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001163804.1 Gene:Clec4a2 / 26888 MGIID:1349412 Length:262 Species:Mus musculus


Alignment Length:150 Identity:44/150 - (29%)
Similarity:62/150 - (41%) Gaps:33/150 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PNKWTMPLLKLGEKRYYL-GIFFKANWFKATQYCRYHGMHLASISSQEEND----RLEKHIRDF- 293
            |..|.:    .|...|.: .:...|:|.|:.:.|...|.||..|.||||.|    .|:.|...| 
Mouse   132 PKDWRL----FGSHCYLVPTVSSSASWNKSEENCSRMGAHLVVIQSQEEQDFITGILDTHAAYFI 192

  Fly   294 GL---GHEHF-WISGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGK 354
            ||   ||..: |:..|...:.           |||  |:.|||::      ..|.|..:..|...
Mouse   193 GLWDTGHRQWQWVDQTPYEES-----------ITF--WHNGEPSS------GNEKCATIIYRWKT 238

  Fly   355 GLKWNDSPCSFETYFVCEVQ 374
            |..|||..||.:...||:::
Mouse   239 GWGWNDISCSLKQKSVCQMK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 41/133 (31%)
Clec4a2NP_001163804.1 CLECT_DC-SIGN_like 131..257 CDD:153060 44/147 (30%)

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