DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tfc and Cd207

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_659192.2 Gene:Cd207 / 246278 MGIID:2180021 Length:331 Species:Mus musculus


Alignment Length:133 Identity:42/133 - (31%)
Similarity:60/133 - (45%) Gaps:21/133 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 RYYLGIFF-----KANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLA 308
            :|:.|.|:     ...|:.|.|:|.....||.|:||:.|...|.|...  |:.|   ||..|...
Mouse   203 KYFSGNFYYFSRTPKTWYSAEQFCISRKAHLTSVSSESEQKFLYKAAD--GIPH---WIGLTKAG 262

  Fly   309 DEGNFFWM---ATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLK-WNDSPCSFETYF 369
            .||:::|:   :..:..:...|..|||||    .|..|:|.   |.....|| |||.||.....|
Mouse   263 SEGDWYWVDQTSFNKEQSRRFWIPGEPNN----AGNNEHCA---NIRVSALKCWNDGPCDNTFLF 320

  Fly   370 VCE 372
            :|:
Mouse   321 ICK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 42/133 (32%)
Cd207NP_659192.2 CLECT_DC-SIGN_like 201..324 CDD:153060 42/133 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840992
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.