DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Reg3b

DIOPT Version :10

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_445741.1 Gene:Reg3b / 24618 RGDID:3254 Length:180 Species:Rattus norvegicus


Alignment Length:167 Identity:39/167 - (23%)
Similarity:65/167 - (38%) Gaps:43/167 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 ESQYTPNKWTMPLLKL----GEKRY--YLGIFFK--ANWFKATQYC--RYHGMHLASISSQEEND 284
            :.:.:|.|  :|..::    |.:.|  |....|:  ..||.|...|  |..| ||.|:.:..|..
  Rat    30 QGEDSPKK--IPSARISCPKGSQAYGSYCYALFQIPQTWFDAELACQKRPEG-HLVSVLNVAEAS 91

  Fly   285 RLEKHIRDFGLGHEHFWISGTD--LADE---GNFFWMATGRPITFTNWNAGEPNNFRYENGEEEN 344
            .|...:::.|..:::.||...|  |..|   |.:.| :....:.:.||              |.|
  Rat    92 FLASMVKNTGNSYQYTWIGLHDPTLGGEPNGGGWEW-SNNDIMNYVNW--------------ERN 141

  Fly   345 ---------CLELWNRDGKGLKWNDSPCSFETYFVCE 372
                     |..| :|....|:|.|:.|..:..:||:
  Rat   142 PSTALDRGFCGSL-SRSSGFLRWRDTTCEVKLPYVCK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 35/144 (24%)
Reg3bNP_445741.1 CLECT_REG-1_like 45..178 CDD:153064 36/150 (24%)

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