DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and clec-89

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001293152.1 Gene:clec-89 / 24104193 WormBaseID:WBGene00015631 Length:324 Species:Caenorhabditis elegans


Alignment Length:170 Identity:39/170 - (22%)
Similarity:60/170 - (35%) Gaps:48/170 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PNCVDESQYTPNKWTMPLLKLGEKRYYLGIFFKANWFKATQYCRY----HGMHLASISSQEENDR 285
            |||       |..|...  :.|...|:|. ..:....:|..||:.    ...|:..:....|||.
 Worm    29 PNC-------PKSWHHD--EPGRTCYHLA-RRRMRLTEAHSYCQKMIADGSAHVLRVECGGENDF 83

  Fly   286 LEKHIRDFGLGH-EHFWISGT---DLAD-------EGNFFWMATGRPITFTNWNAGEPNNFRYEN 339
            :...::    || |..||...   |:.|       .|..:....|:.:.::||..|        |
 Worm    84 ISGLVK----GHSEKVWIDARARFDIVDGAAGLFGPGFVYRWPNGKIVRYSNWANG--------N 136

  Fly   340 GEEE-------NCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            |.||       .|:.: ..||   .|.::.||.....:||
 Worm   137 GLEEVGSSNSNKCINI-KSDG---HWMNANCSSTAAVICE 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 33/146 (23%)
clec-89NP_001293152.1 CLECT 31..172 CDD:214480 35/166 (21%)
CLECT 183..321 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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