DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Sftpa1

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_075623.2 Gene:Sftpa1 / 20387 MGIID:109518 Length:248 Species:Mus musculus


Alignment Length:135 Identity:34/135 - (25%)
Similarity:63/135 - (46%) Gaps:22/135 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 LLKLGEKRYYLGIFF----KANWFKATQYCRYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWI 302
            :|.:|:|     :|.    ..|:....:.|...|.|:|:..:.|||:.:....:.:   :.:.::
Mouse   131 MLSVGDK-----VFSTNGQSVNFDTIREMCTRAGGHIAAPRNPEENEAIASITKKY---NTYPYL 187

  Fly   303 SGTDLADEGNFFWMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFET 367
            ...:....|:|.:: .|..:.:|||..|||..    .|:|: |:|::. ||   ||||..|....
Mouse   188 GVIEGQTPGDFHYL-DGASVNYTNWYPGEPRG----RGKEK-CVEMYT-DG---KWNDKGCLQYR 242

  Fly   368 YFVCE 372
            ..:||
Mouse   243 LAICE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 31/128 (24%)
Sftpa1NP_075623.2 Collagen 27..98 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..100
CLECT_collectin_like 136..248 CDD:153061 32/130 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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