DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Reg3g

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_035390.1 Gene:Reg3g / 19695 MGIID:109406 Length:174 Species:Mus musculus


Alignment Length:180 Identity:42/180 - (23%)
Similarity:64/180 - (35%) Gaps:43/180 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 QYYGNIFHRD-PSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRY--YLGIFFKA--NWFKAT 264
            |..|.:..:| ||..   :.||.                   |.:.|  |....|..  ||:.|.
Mouse    23 QVQGEVAKKDAPSSR---SSCPK-------------------GSRAYGSYCYALFSVSKNWYDAD 65

  Fly   265 QYC--RYHGMHLASISSQEENDRLEKHIRDFGLGHEHFWISGTDLA-----DEGNFFWMATGRPI 322
            ..|  |..| ||.|:.|..|...|...|:..|...::.||...|..     :.|.:.| :....:
Mouse    66 MACQKRPSG-HLVSVLSGAEASFLSSMIKSSGNSGQYVWIGLHDPTLGYEPNRGGWEW-SNADVM 128

  Fly   323 TFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            .:.||....      .:....:|..| :|....|||.::.|:.|..:||:
Mouse   129 NYINWETNP------SSSSGNHCGTL-SRASGFLKWRENYCNLELPYVCK 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 34/135 (25%)
Reg3gNP_035390.1 CLECT_REG-1_like 40..172 CDD:153064 37/160 (23%)
EPN. /evidence=ECO:0000250 114..116 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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