DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfc and Reg3a

DIOPT Version :9

Sequence 1:NP_612091.1 Gene:tfc / 38141 FlyBaseID:FBgn0035199 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_035389.1 Gene:Reg3a / 19694 MGIID:109408 Length:175 Species:Mus musculus


Alignment Length:188 Identity:45/188 - (23%)
Similarity:66/188 - (35%) Gaps:58/188 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 QYYGNIFHRD-PSENEVDNDCPNCVDESQYTPNKWTMPLLKLGEKRY----YLGIFFKANWFKAT 264
            |..|..|.:: ||..   ..||                   :|.|.|    |..:....:||:|.
Mouse    23 QVQGEDFQKEVPSPR---TSCP-------------------MGYKAYRSHCYALVMTPKSWFQAD 65

  Fly   265 QYC--RYHGMHLASISSQEE--------NDRLEKHIRDFGLGHEHFWISGTD-----LADEGNFF 314
            ..|  |..| ||.||.|..|        |.|::        .::..||...|     ..:.|.:.
Mouse    66 LVCQKRPSG-HLVSILSGGEASFVSSLVNGRVD--------NYQDIWIGLHDPTMGQQPNGGGWE 121

  Fly   315 WMATGRPITFTNWNAGEPNNFRYENGEEENCLELWNRDGKGLKWNDSPCSFETYFVCE 372
            | :....:.:.||: |:|::    .....:|..|....| .|||.|..|.....|||:
Mouse   122 W-SNSDVLNYLNWD-GDPSS----TVNRGHCGSLTASSG-FLKWGDYYCDGTLPFVCK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfcNP_612091.1 CLECT 249..373 CDD:153057 36/143 (25%)
Reg3aNP_035389.1 CLECT 40..173 CDD:295302 40/168 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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